Introduction
Requirements
1. Build or acquire MMSeqs 2 database
2. Generate jobfiles (executables) containing parameters to run MMseqs2
3. Execute jobfiles to generate the functional predictions
4. Pick the top functional hit for each read
Authors
Authors: Robyn Wright, Dhwani Desai, Gina Filloramo & André Comeau
First created: 13 July 2021
Last updated: 16 October 2026
Based on initial versions by: André Comeau (Metagenomics Standard Operating Procedure v3) and Robyn Wright (Microbiome Helper 2 Annotation of reads with MMSeqs2)
